Tip labels

Print tip labels of a tree

Command identity

Canonical command:: tip_labels
Handler:: tip_labels
Aliases:: labels, tl, tree_labels
Standalone executables:: pk_tip_labels, pk_labels, pk_tl, pk_tree_labels
Categories:: Tree manipulation & utilities

Runtime interface

Synopsis

phykit tip_labels <tree> [--json]

Arguments

This table is generated from the live command parser. It is the authoritative source for accepted spellings, required arguments, types, defaults, and choices.

Argument	Required	Type	Default	Choices
`tree`	true	str	required	any
`--json`	false	boolean	false	any

Output and errors

--json provides the command's structured JSON representation. Unless the guidance below states otherwise, results are emitted as command output. Invalid command syntax exits with status 2. Input validation and scientific limitations are described in the guidance below.

Guidance, interpretation, and examples

Prints the tip labels (or names) of a phylogeny.

phykit tip_labels <tree> [--json]

Options:
<tree>: first argument after function name should be a tree file
--json: optional argument to print results as JSON